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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801281.1_cds_XP_016474026.1_6578
CDS Infomation

[gene=LOC107795823] [db_xref=GeneID:107795823] [protein=protein HGH1 homolog isoform X2] [protein_id=XP_016474026.1] [location=complement(join(99549..99581,99776..99907,100905..101018,101297..101445,103060..103138,103750..103947,104908..105030,106477..106530))] [gbkey=CDS]
Sequence

ATGGCAACGGAGTTAGAAGAATTGATTGCCTTTCTCTCTTCCCCTTCTCCTCCAGTGAAA
AAATTAGCGGTTGATATTGTTCGTGATTACACTGGTTCTGAGGATGGCTTGGAATCTCTT
GGCAAGTATTCTAACGTTGTGCTTCCCTCTCTGTTTCGCCTTCTCGGTGAAAAAAAGGTG
GTTTCTGAACCTGCGGCTCAAGCACTAGTAAATCTGTCACAAAAGCCAGAGTTGGCAGGT
AAGATGGTTGAGATGCATATGGTTAAGACATCGATGGAGACCCTGTACAAGCAAGATTGT
GAAATCACAACTCTGCTGATTATGCTCCTTGTTAATCTCACACAGCTGGATGCTGGTATT
GATTCTTTGCTTCAGTCTGCAGACGAGAAGATGCATGGCTTAAATGTCATGAAGCTTGTG
AGATCATTTTGTTCGTCCCCCGATGAGGGAAAAGGTGATCCCTTTGAACATGTGGCTTCT
GTACTTGTTAACATTTCCAAGAAGGAACAGGGAAGAAAGCTTCTGCTTGAACCAAAACGA
GGCCCTCTAATAAAGCAAATAGTACAGCAGTTTCATTCTAAGAACTTGTTGAGAAAGAAA
GGGGTCGCAGGAACCATCCGGAACTGCTGCTTTGAAGCGGAGAGTCAGCTTCAAAATTTG
CTTTTGATTTCTGAGTTCTTGTGGCCAGCTCTGCTCCTGCCTGTTGCTGGAAATAAGGTT
TATAGTAAGGAAGACGCTCGTAAAATGCCACAGGAGCTTGCGAGTGCACTCTCAATCGAG
CGAGAACCTGTTACTGATCCGGAAATTCGTGTACAGGCGCTAGAGGCTATTTATTTGCTC
ATATTACAGGCAGCTATCGTTCTATCTAGTGAGATCATCTAA

Peptide Sequence

PEP ID

XP_016474026.1
PEP Infomation

PREDICTED: protein HGH1 homolog isoform X2 [Nicotiana tabacum]
Sequence

MATELEELIAFLSSPSPPVKKLAVDIVRDYTGSEDGLESLGKYSNVVLPSLFRLLGEKKV
VSEPAAQALVNLSQKPELAGKMVEMHMVKTSMETLYKQDCEITTLLIMLLVNLTQLDAGI
DSLLQSADEKMHGLNVMKLVRSFCSSPDEGKGDPFEHVASVLVNISKKEQGRKLLLEPKR
GPLIKQIVQQFHSKNLLRKKGVAGTIRNCCFEAESQLQNLLLISEFLWPALLLPVAGNKV
YSKEDARKMPQELASALSIEREPVTDPEIRVQALEAIYLLILQAAIVLSSEII

Transcript Sequence

Gene sequence data has not been registered.